RNA-seq of pooled Oedura marmorata livers - SRA

SRX23705179: RNA-seq of pooled Oedura marmorata livers
1 ILLUMINA (Illumina HiSeq 2500) run: 31.2M spots, 6.2G bases, 2.4Gb downloads

Design: Total RNA extracted using Qiagen RNeasy Plus minikit; RNA pooled in equimolar ratios by species and location (n=10); rRNA depleted using Illumina Ribo-zero Gold epidemiology and library prepared using Illumina TruSeq Total RNA Library Preparation protocol; paired-end sequencing (100bp) conducted on an Illumina Hiseq 2500.

Submitted by: University of Sydney

Study: Australian lizard viromes

PRJNA1078569 • SRP491110 • All experiments • All runs

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Total RNA sequencing was conducted on RNA extracted from the livers of several species of healthy Australian lizards. Each sequencing library consisted of pooled RNA from multiple animals of the same species and ribosomal RNA depletion was conducted prior to sequencing to enrich for viruses. The purpose of this study was to characterise the liver virome of various lizard species in Australia to better understand viral evolution and ecology.

Sample: Pool of 10 Oedura marmorata liver RNA samples

SAMN40006552 • SRS20535097 • All experiments • All runs

Organism: Oedura marmorata

Library:

Name: Omar_M

Instrument: Illumina HiSeq 2500

Strategy: RNA-Seq

Source: METATRANSCRIPTOMIC

Selection: other

Layout: PAIRED

Runs: 1 run, 31.2M spots, 6.2G bases, 2.4Gb

Run	# of Spots	# of Bases	Size	Published
SRR28055546	31,238,197	6.2G	2.4Gb	2024-06-20

ID:: 31989803

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